DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and TM4SF

DIOPT Version :10

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_308575.5 Gene:TM4SF / 1269921 VectorBaseID:AGAMI1_010988 Length:285 Species:Anopheles gambiae


Alignment Length:173 Identity:42/173 - (24%)
Similarity:62/173 - (35%) Gaps:55/173 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GSIKVMVVNLILLLALIASHIWKVSHYNETK-----------QLDATEVYVMD-------LWMKE 117
            |.....:|..|::|.|::.  |.|:    ||           :...||....|       :|.: 
Mosquito    84 GLFCAFLVLFIVILFLVSG--WSVA----TKAHLIVPAEVAIETSFTEFLAKDNTNDQTHIWNR- 141

  Fly   118 LVHHGAMQDLQQEYECCGDKGFSDY-TSLNMKVPRSCFHTKDGIHALYPYGEGCMAAVKRAYLQI 181
                     ||:::.|||..|..|| .:..|..|.||:...|    ...:..|||          
Mosquito   142 ---------LQRDFRCCGYNGIHDYKKNKQMGFPWSCYDPID----TKVFNTGCM---------- 183

  Fly   182 YRYEKWVHCGLIGYEVVGII------LGITLCCQLTNKTRRYT 218
            :.:.|.:...:|...||.:.      |||....|||...||.|
Mosquito   184 HVFVKSIEMNMIRVAVVAVASALIQSLGIFCAIQLTMLLRRPT 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspanin 8..208 CDD:459767 36/161 (22%)
tetraspanin_LEL 110..178 CDD:239401 18/75 (24%)
TM4SFXP_308575.5 None

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