DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and tspan33b

DIOPT Version :10

Sequence 1:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_005159085.1 Gene:tspan33b / 567512 ZFINID:ZDB-GENE-060503-607 Length:266 Species:Danio rerio


Alignment Length:240 Identity:47/240 - (19%)
Similarity:85/240 - (35%) Gaps:57/240 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLKAVLIVLNVLLSLIGVTLIALSVY-ELNSSTPGTFEHIAI---VVQIFVGTFVVLTSFLGCFA 67
            :::..|...:.|..:..:.::|:.|| :...:|....:...|   |:.|.||..:...:|.||..
Zfish    19 WIRYFLFFFSFLFWVFSLLIVAIGVYAKAQKATDTVRDSFLIDPAVILIVVGVVMFFITFCGCIG 83

  Fly    68 TARVSLGL--VWSYVICLLILLCLQIYIIAAAHS---TDYVERSKKDFLATWADQRTNVERISLL 127
            ..|.::.|  ::|:.:.|:.|..:.|.|:...:|   .|.:....|..:..:.|.......:..:
Zfish    84 ALRENIRLLKIFSFSLTLVFLTQMAIAILGFFYSEQTRDALGEFVKKAIVHYRDDLDLQNLMDYI 148

  Fly   128 EQKYSCCGQLGAHD-----YILMGR--------GIPLSCYKDQERREY----------------- 162
            ::::.|||.....|     |.....        .:|.||.....|...                 
Zfish   149 QKEFKCCGWTNYTDWSWNPYFNCSSSNPSNERCSVPFSCCTPLPRETVINSMCGFGIQTQNHLNA 213

  Fly   163 --SLFSGGCLQAVQAHATDNVAIGLIIKWL---LLLVEFAALGAA 202
              |::|.||        .|...|     |:   |||.....||.|
Zfish   214 TKSIYSVGC--------ADRAVI-----WIESHLLLFGALTLGLA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 26/135 (19%)
tetraspanin_LEL 96..180 CDD:239401 17/118 (14%)
tspan33bXP_005159085.1 Tetraspanin 36..>156 CDD:459767 24/119 (20%)
penumbra_like_LEL 114..234 CDD:239411 20/132 (15%)

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