DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and zgc:110329

DIOPT Version :10

Sequence 1:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001017802.1 Gene:zgc:110329 / 550500 ZFINID:ZDB-GENE-050417-334 Length:346 Species:Danio rerio


Alignment Length:261 Identity:58/261 - (22%)
Similarity:105/261 - (40%) Gaps:66/261 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLKAVLIVLNVLLSLIGVTLIALSVY-----ELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGCF 66
            |||..|.|.::|.||:|:.::.:.||     :.|.:..|.|...|:|: |.:|..:...|.:|..
Zfish    16 FLKFSLNVYSMLFSLLGLYVLCIGVYAEVERQKNRTLEGVFLAPAVVL-ILLGLVMFTVSVIGMV 79

  Fly    67 ATARVSLGLVWSYVICLLILLCLQ-----IYIIAAAHSTDYVERSKKDFLATWADQRTNVERISL 126
            .:.|.:..|:..::..|.:||.||     |.:|....:....:.|.::.:..:.|.......:..
Zfish    80 GSLRDNKTLLHMFLCVLCVLLALQAIALIIALIFEKTTIKLFQNSIREGIKHYYDDLDFKNILDY 144

  Fly   127 LEQKYSCCG-----QLGAHDYIL------MGRGIPLSC-------------------YKDQERRE 161
            :::|:||||     ....:.|.|      :..|:|.:|                   ::.:|..:
Zfish   145 VQEKFSCCGGDEYKDWEVNQYHLCDGKSPLACGVPYTCCIRQSVGEVVNTLCGYKTLHQQREALD 209

  Fly   162 YSLFSGGCLQAVQAHATDNV--------AIGL---------IIKWLLL--------LVEFAALGA 201
            ..:...||:.||.....||:        |:||         .:.|.||        :|:|..|..
Zfish   210 GVIHVRGCIHAVNLWMGDNIGATIGICCAVGLPQLLGILLSCVFWNLLVEMSESQDMVDFKFLKR 274

  Fly   202 A 202
            |
Zfish   275 A 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 33/136 (24%)
tetraspanin_LEL 96..180 CDD:239401 17/113 (15%)
zgc:110329NP_001017802.1 Tetraspanin 17..255 CDD:459767 50/238 (21%)
penumbra_like_LEL 111..229 CDD:239411 19/117 (16%)

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