DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and tspan14

DIOPT Version :10

Sequence 1:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:230 Identity:52/230 - (22%)
Similarity:83/230 - (36%) Gaps:65/230 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KAVLIVLNVLLSLIGVTLIALSVYE------LNSSTPGT----FEHIAIVVQIFVGTFVVLTSFL 63
            |.:|...|::..|.|:.|:.:.::.      |:..|..|    |:.:.:|  :.||..:....|.
 Frog    16 KYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFDPVWLV--LVVGVIMFTLGFA 78

  Fly    64 GCFATARVSLGLVWSYVICLLILLCLQIYII---------AAAHSTDYVERSKKDF----LATWA 115
            ||....|.:        ||||...|..|.:|         .|....|:|:...|||    :.::.
 Frog    79 GCVGALREN--------ICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFENNIKSYR 135

  Fly   116 DQRTNVERISLLEQKYSCCGQLGAHDYILMGR-------------GIPLSC-------------- 153
            |.......|..|::...|||.:...|:.|...             |:|.||              
 Frog   136 DDIDLQNLIDSLQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSCCVPDPAQTVVNTQC 200

  Fly   154 -----YKDQERREYSLFSGGCLQAVQAHATDNVAI 183
                 .|....|..:.||.||:.|::|....|:.|
 Frog   201 GYDARRKKPNERPNTTFSKGCISALEAWLPRNIYI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 34/148 (23%)
tetraspanin_LEL 96..180 CDD:239401 26/119 (22%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 52/230 (23%)
TM4SF9_like_LEL 113..233 CDD:239412 25/119 (21%)

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