DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and tspan36

DIOPT Version :10

Sequence 1:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:251 Identity:59/251 - (23%)
Similarity:99/251 - (39%) Gaps:56/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFE------HIAIVVQIFVGTFVV- 58
            |||.....|.:|::|:::....|..|..:..|.:.|.  ..||      |..|...|.:|..|| 
Zfish     1 MDCGIITSKTILLLLSLIFWAAGAALAYVGSYVIKSY--NNFEDFMSDRHTLIPAAIIIGVAVVM 63

  Fly    59 -LTSFLGCFATAR---VSLGLVWSYVICLLILLCLQIY-----IIAAAHSTDYVERSKKDFLATW 114
             :..|:||.||.|   |.|||   ::|.::::...::.     ||........:|:|..|....:
Zfish    64 FIIGFVGCCATLRESKVGLGL---FLIIIMLIFAAEVTAFVFGIIYRGRIRGDLEKSMNDVFLKY 125

  Fly   115 ADQRTNVERISLLEQKYSCCGQLGAHDYILM------GRGIPLSCYK-------DQERREYSLFS 166
            ....:....:..|:.:..|||.....|:.|.      ...:|.||.|       .|..:...|.:
Zfish   126 DGLNSETHAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSCCKANMTQCTGQLSQPDLLNT 190

  Fly   167 GGC-------LQAVQAHATDNVAIGLIIKWLLLLVEFAAL---GAATHLGITVRNK 212
            .||       ||.|.::|            :|:::.||.:   |..:...||.::|
Zfish   191 QGCEAKLEQVLQDVLSYA------------MLVILGFAIIKFFGMLSVCVITCKSK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 33/142 (23%)
tetraspanin_LEL 96..180 CDD:239401 21/103 (20%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 54/239 (23%)
TM4SF8_like_LEL 103..206 CDD:239416 22/102 (22%)

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