DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp74F

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster


Alignment Length:222 Identity:50/222 - (22%)
Similarity:93/222 - (41%) Gaps:34/222 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYEL------NSSTPGTFEHIAIVVQIFVGTFVVL 59
            |||...|:|..|.:.|.::.:.|..:..|:::.|      |..........|:.|.:.....:.|
  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICL 71

  Fly    60 TSFLGCFATAR-VSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSK---------KDFLATW 114
            .|||||....: |...|:..::|..|:.:.:.|..:..     ||.|.:         :..:|.:
  Fly    72 VSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLG-----YVFRERVQQTMRQEMRSTMALY 131

  Fly   115 ADQRTNVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKD---QERREYSLF-------SGGC 169
            ..:|...:...|.:::..|||....||:...| .:|.||.::   .:|:|.::|       :.||
  Fly   132 GSRREITQAWDLTQERLQCCGVDTWHDWNRYG-PVPESCCQELFGGQRKECTIFPTITNLYNQGC 195

  Fly   170 LQAVQAHATDNVAI--GLIIKWLLLLV 194
            |........|:.|:  |..|...:|::
  Fly   196 LYVTTNFIRDHAAVIGGTSIAVAILMI 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 46/215 (21%)
tetraspanin_LEL 96..180 CDD:239401 21/102 (21%)
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 46/215 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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