DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp42Eq

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster


Alignment Length:219 Identity:64/219 - (29%)
Similarity:97/219 - (44%) Gaps:2/219 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGC 65
            |.|.|..||....||:.|..::....||...|.|.:.:......:..::.|.:|..:..::..||
  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYALIAFSHSVAIRVPSILGIVLGGLLFFSTIFGC 65

  Fly    66 FATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLATWADQRTNVERISLLEQK 130
            .|..|.|:.:.|.|...||.|:..||.:| .|...:|...:.:.....|..|..:.:|:|..|.|
  Fly    66 IAALRESIRMTWIYAAILLALVFSQITVI-LAQPINYELLANETIYDAWQGQLYHSDRMSYFEIK 129

  Fly   131 YSCCGQLGAHDYILMGRGIPLSCYKDQERR-EYSLFSGGCLQAVQAHATDNVAIGLIIKWLLLLV 194
            |.||||.|..:|...|..||.|||.:|... ...|::.||...:.|..........|..|.::.|
  Fly   130 YHCCGQTGPANYPDSGLVIPQSCYFNQNATVTTDLYTVGCNHQLAAAFVKGTRWEKITDWSVVGV 194

  Fly   195 EFAALGAATHLGITVRNKLRRERF 218
            |...:..|..|.||::|..||..:
  Fly   195 EILTVIIAGLLAITLQNAERRRLY 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 54/191 (28%)
tetraspanin_LEL 96..180 CDD:239401 26/84 (31%)
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 57/201 (28%)
tetraspanin_LEL 95..173 CDD:239401 25/77 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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