DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp42El

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster


Alignment Length:227 Identity:65/227 - (28%)
Similarity:103/227 - (45%) Gaps:19/227 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGC 65
            |.|.|..:|..|.:.|.|.:::|:.::....... .:.|..:   ||.:.|..||.:|::.| ||
  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGW-GAMPDAY---AIGILILGGTILVISLF-GC 60

  Fly    66 FATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLAT----WADQRTNVERISL 126
            ....|.|..::|:|...|||||.|.:..|.......:    ||..|.|    |..::|....:.:
  Fly    61 CGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVF----KKYALQTVENQWELEQTKPGSMDI 121

  Fly   127 LEQKYSCCGQLGAHDYI---LMGRGIPLSCYKDQE-RREYSLFSGGCLQAV-QAHATDNVAIGLI 186
            :::.|.|||:..|.||:   .....:|.||.||.. ....:|:..|||..| :|.|.:...:| .
  Fly   122 IQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLG-Y 185

  Fly   187 IKWLLLLVEFAALGAATHLGITVRNKLRRERF 218
            ::|.||......|..|..|.|...|:.||..:
  Fly   186 LEWGLLGFNAVILLLAIILAIHYTNRRRRYNY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 55/199 (28%)
tetraspanin_LEL 96..180 CDD:239401 25/92 (27%)
Tsp42ElNP_523638.1 Tetraspannin 7..196 CDD:278750 55/198 (28%)
tetraspanin_LEL 94..178 CDD:239401 24/87 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467723
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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