DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:231 Identity:64/231 - (27%)
Similarity:111/231 - (48%) Gaps:15/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTP---------GTFEHIAIVVQIFVGTF 56
            |.|.|..|:.||.|::.:.:|.|..||....:.|:|.:.         |  |.:|.|:.:.:||.
  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHG--EDLAAVLCVLLGTV 63

  Fly    57 VVLTSFLGCFATARVSLGLVWSYVICLLILLCLQIYIIAAAH--STDYVERSKKDFL-ATWADQR 118
            :|:.|..|..|.|:.|..|:..|.:.|:.||.:||.:::.::  |.|::..|.:..| ..|..|.
  Fly    64 IVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQH 128

  Fly   119 TNVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQE-RREYSLFSGGCLQAVQAHATDNVA 182
            .....::..|:...|||:..|.||:.:.:..|.||..::: .:..:||..||....:.:.....|
  Fly   129 EGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGAKTA 193

  Fly   183 IGLIIKWLLLLVEFAALGAATHLGITVRNKLRRERF 218
            ....:.|.|::.|||......:|..::||...|.||
  Fly   194 NFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRF 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 55/203 (27%)
tetraspanin_LEL 96..180 CDD:239401 20/87 (23%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 56/213 (26%)
tetraspanin_LEL 109..192 CDD:239401 19/82 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467721
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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