DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp42Ef

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:242 Identity:59/242 - (24%)
Similarity:105/242 - (43%) Gaps:53/242 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSF----LGC 65
            ||.:|.::..|:||.:|:.:.||:..:|              :.|...:.....||::    || 
  Fly     4 TSSVKLIVYALDVLCTLLALVLISFGIY--------------VAVSYNLNEIGQLTAYGYVGLG- 53

  Fly    66 FATARVSLGLVWSYV------IC----LLILLCLQI-------YIIAAAHSTDYVERSKKDFL-A 112
               |...|.::|.|:      :|    .:|.|||.|       |::.....|  |..:..:.| |
  Fly    54 ---AAALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKT--VASNLANALEA 113

  Fly   113 TWADQRTNVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQER-REYSLFSGGC---LQAV 173
            ||.::..:...:||.:..:.|||:....|||:..|..|.:|:::.:: :..:|...||   .:..
  Fly   114 TWEEELNSPGAMSLYQNWFQCCGRGSPQDYIVNERLPPETCFRNHDKSKPENLIHTGCRVEFENY 178

  Fly   174 QAHATD--NVAIGLIIKWLLLLVEFAALGAATHLGITVRNKLRRERF 218
            ..|.|.  |:...::|.:.|||...:.     .|..::||..||..|
  Fly   179 WQHLTKIFNILALVLIGFELLLSVISC-----RLCNSIRNDARRSYF 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 51/218 (23%)
tetraspanin_LEL 96..180 CDD:239401 22/90 (24%)
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 52/228 (23%)
tetraspanin_LEL 103..181 CDD:239401 19/77 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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