DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp42Ed

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster


Alignment Length:235 Identity:68/235 - (28%)
Similarity:109/235 - (46%) Gaps:25/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIA-----LSVYELNSSTPGTF--EHIAIVVQIFVGTFVV 58
            |||...|:|.||.:.|:|..:.|:.||.     :|..:..|....||  ..:||:: :.:|..|.
  Fly     1 MDCGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIII-LVLGCVVF 64

  Fly    59 LTSFLGCFATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYV--ERSKKDFLAT-WADQRTN 120
            |.:|:||....|.:...:.||.:.:|:||..|:.:|.... .|:|  ::|.:..:.| |..::|:
  Fly    65 LVAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVW-VDHVQIQQSLEKIVQTIWDQRKTD 128

  Fly   121 VERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQERREYSLFS----GGCLQAVQAHATDNV 181
            ...:..|::.:.|||..|..||   |...|.||.........:|..    ..||:||.:....||
  Fly   129 ALLMDTLQRSFKCCGLNGFADY---GITYPASCCDSPSNGTCALTQVMTRSSCLKAVDSFWDTNV 190

  Fly   182 AIGLIIKWL---LLLVEFAALGAATHLGITVRNKLRRERF 218
            :   |||:.   :..||..|...|..|....||..||:.:
  Fly   191 S---IIKYAGLGVTAVELVAFIFACCLANQTRNSQRRQNY 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 57/207 (28%)
tetraspanin_LEL 96..180 CDD:239401 22/90 (24%)
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 60/216 (28%)
tetraspanin_LEL 104..189 CDD:239401 22/88 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467717
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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