DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42En and Tsp33B

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:255 Identity:55/255 - (21%)
Similarity:92/255 - (36%) Gaps:73/255 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RTSFLKAVLIVLNVLL---SLIGVTLIALSVYELNSSTPGTFEHI--AIVVQIFVGTFV----VL 59
            |..|.:| .:.|::||   ::||:.::.::.| .::...|....|  .:|.....|.:|    |:
  Fly     2 RQPFRRA-SVYLHLLLITEAVIGLLILVVTAY-YHTVLTGYLSDIECRLVYGYLFGIYVFGAQVV 64

  Fly    60 TSFLGCFA----------TARVSLGL-VWSYVICLLILL---CL-QIYIIAAAHSTDYVERSKKD 109
            .:||...|          |..:.|.| ||::..|::|..   |: .:|     ...|.:|.:...
  Fly    65 VTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWNLY-----RGVDVLENAADT 124

  Fly   110 FLATWADQRTNVERISL----LEQKYSCCGQLGAHDYI---LMGRG---------IPLSCYK--- 155
            .|....|...:.....|    |:....|||..|..|::   .|.|.         .|.:|.|   
  Fly   125 SLTRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSC 189

  Fly   156 ----------------DQERREY------SLFSGGCLQAVQAHATDNVAIGLIIKWLLLL 193
                            ...|:.:      |:.:.|||.|. ..|..|....|:..|:|.|
  Fly   190 DSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAF-VSAVWNCFYILMALWVLAL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 53/251 (21%)
tetraspanin_LEL 96..180 CDD:239401 23/124 (19%)
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 49/236 (21%)
CD151_like_LEL 112..237 CDD:239408 25/130 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442992
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.