DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp26A

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster


Alignment Length:247 Identity:61/247 - (24%)
Similarity:99/247 - (40%) Gaps:60/247 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIA---------IVVQIFVGTFVVLTSFL 63
            ||.:|...||:|.|..:.::::.::..  |..|.|.:||         ..|.|.:|....|..|:
  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAW--SEKGMFRNIARLHFIALDPAFVLIILGGVTFLLGFM 81

  Fly    64 GCFATARVSLGLVWSYVICLLILLCLQIYIIAAAH-------STDYVERSKKDFLATW---ADQR 118
            |.....|.:..|:.:|.|.|.:||..:|...|.|.       ..|......|.|:..:   |||:
  Fly    82 GSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDADQQ 146

  Fly   119 TNVERISLLEQKYSCCGQLGAHDY----------ILMGR----GIPLSCYK-------------- 155
            ..::.|.  |....|||..|..|:          |.:|.    |:|.||.:              
  Fly   147 NLIDWIQ--EDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEVIKNKQCGY 209

  Fly   156 DQERREY----SLFSGGCLQA----VQAHATDNVAIGLIIKWLLLLVEFAAL 199
            |..:..|    ::...|||:|    ::||.. :||||.:...:|..:|.:.:
  Fly   210 DVRKEGYPVDRNIHERGCLRAGEDWLEAHLI-SVAIGCVALLVLQGMELSKI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 61/245 (25%)
tetraspanin_LEL 96..180 CDD:239401 28/129 (22%)
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 59/238 (25%)
DUF2207 <65..157 CDD:303056 24/93 (26%)
TM4SF9_like_LEL 118..239 CDD:239412 26/122 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442896
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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