DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and cd63

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:243 Identity:49/243 - (20%)
Similarity:96/243 - (39%) Gaps:59/243 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAI-------------VVQIFVGTFVVL 59
            :|.:|...|.:..|.|:.||.|          |...|:::             :|.|.||..:..
Zfish    10 VKYLLFFFNFIFWLCGLALIVL----------GILVHVSLHNTAILQGASGSPMVLIVVGVIIFF 64

  Fly    60 TSFLGCFATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLATWADQ------- 117
            .||.||....:.:..:|.::.|.|.:::..:|    .|....|:.|.|.:.|   .||       
Zfish    65 ISFFGCCGAWKENQCMVVTFAIILSLIVITEI----GAGIAGYIFRGKVNEL---LDQSFNTMIA 122

  Fly   118 ---RTNVERISL--LEQKYSCCGQLGAHDYILMGR---GIPLSCYKDQER--------REYSLFS 166
               :|...|.:|  ::::..|||...:.|::....   .:|.||.|:..:        :...::.
Zfish   123 GYNKTEEYRTTLDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCCKNVTKNCGIGAMTKPTVIYL 187

  Fly   167 GGCLQAVQAHATDN---VAIGLIIKWLLLLVEFAALGAATHLGITVRN 211
            .||...::....:|   :|:|.::   :..|:...:..|..|...:|:
Zfish   188 EGCQPILETRIKENILWIAVGALV---IGFVQITGIVLACILSRAIRS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 46/229 (20%)
tetraspanin_LEL 96..180 CDD:239401 20/106 (19%)
cd63NP_955837.1 Tetraspannin 9..230 CDD:278750 48/239 (20%)
CD63_LEL 103..202 CDD:239419 19/101 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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