DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Tsp5D

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster


Alignment Length:269 Identity:58/269 - (21%)
Similarity:97/269 - (36%) Gaps:96/269 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LNVLLSLIGVTLIALSVY-ELNSSTPGTF--EHIAIVVQ-IFVGT----FVVLTSFLGCFATARV 71
            ||::|.|.....:...:: .|:.:...|.  :|..:... ||:|.    |||  ||.||..    
  Fly    16 LNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAGLSADTIFMGIGGTGFVV--SFFGCCG---- 74

  Fly    72 SLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLA-------------TWADQ-RTNVE 122
                .|....|||:|..:.|.::..:           :||.             |.|:: |..:|
  Fly    75 ----AWVQSRCLLVLYFMLIVMLFMS-----------EFLVGSIAFLFRGGLGRTLANELRFGIE 124

  Fly   123 R---------------ISL---LEQKYSCCGQLGAHD-YILMG----RGIPLSCYKD--QERREY 162
            |               .|:   ::|.:.|||.....| |.:..    |.:|.||.:.  .:|:..
  Fly   125 RHYNSSDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVL 189

  Fly   163 SLFSG--------------------GCLQAVQAHATDNV----AIGLIIKWLLLLVEFAALGAAT 203
            :..||                    ||..::|:..|..:    |:||.|.:    |:...|..:.
  Fly   190 TEGSGDGMMRPDCGRSENPSLWWDKGCAHSLQSWFTGQLNVVGAVGLGIAF----VQLFGLITSM 250

  Fly   204 HLGITVRNK 212
            .|..||::|
  Fly   251 LLFCTVKHK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 53/254 (21%)
tetraspanin_LEL 96..180 CDD:239401 25/142 (18%)
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 55/264 (21%)
NET-5_like_LEL 105..228 CDD:239418 23/122 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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