Protein Alignment Tsp42En and Rom1

DIOPT Version :10

• Sequence 1: NP_523640.1
• Gene: Tsp42En / 35624
• FlyBaseID: FBgn0033135
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_001009690.1
• Gene: Rom1 / 309201
• RGDID: 1306070
• Length: 351
• Species: Rattus norvegicus
• Alignment Length: 280
• Identity: 54/280 - (19%)
• Similarity: 93/280 - (33%)
• Gaps: 110/280 - (39%)

  Fly    14 VLNVLLSLI-GVTLIALSVYELNSSTPGTFEHIAIVVQIF-VGTF-------------------V 57
            :|:.||:|. |:||:...             |  ::||:: :|||                   |
  Rat    23 LLSWLLALAGGLTLLCSG-------------H--LLVQLWHLGTFLAPSCSFPALPQTALAAGAV 72

  Fly    58 VLTSFLGCFATARVSLGLV----WSYVICLLIL-------------LCLQIYIIAAAHSTDYVER 105
            .|.:.||....:|.||...    |..|:..|::             |.|.:.:..:.|..  :|.
  Rat    73 ALGTGLGGAGASRASLDAAQYPPWRGVLTPLLVVGTAAGGGLLTLGLGLALALPVSLHQG--LEE 135

  Fly   106 SKKDFLATWADQRT----NVERI-SLLEQKYSCCGQLGAHDY----------------------- 142
            ..:..||.:.|...    ..:|: ..|:.:|.|||:.|..|:
  Rat   136 GLQAALAHYKDTEVPGHCQAKRLMDELQLRYHCCGRHGYKDWFGVQWVSSRYLDPNDQDVVDRIQ 200

  Fly   143 -----ILMGRGIPLSCYK---------------------DQERREYSLFSGGCLQAVQAHATD-N 180
                 :.:..|:|.||..                     |..:...:|::.||.:.:..|... :
  Rat   201 SNVEGLYLIDGVPFSCCNPHSPRPCLQSQLSDPYAHPLFDPRQPNLNLWAQGCHEVLVGHLQGLS 265

  Fly   181 VAIGLIIKWLLLLVEFAALG 200
            ..:|.|:...|||.....||
  Rat   266 GTLGSILAVTLLLQVLVLLG 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42En	NP_523640.1	Tetraspanin	8..>135	CDD:459767	34/163 (21%)
		tetraspanin_LEL	96..180	CDD:239401	22/138 (16%)
Rom1	NP_001009690.1	peripherin_like_LEL	128..264	CDD:239415	22/137 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	329..351