DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and tsp-7

DIOPT Version :9

Sequence 1:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:198 Identity:43/198 - (21%)
Similarity:85/198 - (42%) Gaps:27/198 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFLKAVLIVLNVLLSLIGVTLIAL-SVYELNSSTPGTFEHI----------AIVVQIFVGTFVVL 59
            :.:|.:|.:.|::|.:.|::||.: |:.:|.      |:::          ..::.:.:|:...|
 Worm     7 TIVKYLLFLANLVLWVGGLSLIIVGSILQLK------FDNVLDILGDERLATPILLLVIGSLCTL 65

  Fly    60 TSFLGCFATARVSLGLVWSYVICLLILLCLQI--YIIAAAHSTDY---VERSKKDFLATWADQRT 119
            ..||||....|.:..|..|:.:.|.:|:..:|  .||..|....:   :....:..:..:.:.|.
 Worm    66 LGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRG 130

  Fly   120 NVERISLLEQKYSCCGQLGAHDYILMGRGIPLSCYKDQ----ERREYSLFSGGCLQAVQAHATDN 180
            .........|.:.|||...:.|::.. ..||.||..::    .|....||..||:.:|:.....|
 Worm   131 VESAWDKTHQLFECCGVTNSSDWLTF-TTIPDSCCIEEIEGCARENAPLFEPGCIHSVEQWVLKN 194

  Fly   181 VAI 183
            .|:
 Worm   195 GAM 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 43/196 (22%)
tetraspanin_LEL 96..180 CDD:239401 17/90 (19%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 43/197 (22%)
NET-5_like_LEL 104..195 CDD:239418 17/91 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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