DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42En and Cd82

DIOPT Version :10

Sequence 1:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_031682.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:239 Identity:51/239 - (21%)
Similarity:95/239 - (39%) Gaps:51/239 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KAVLIVLNVLLSLIGVTLIALSVYEL---NS-----STPGTFEHIAIVVQIFVGTFVVLTSFLGC 65
            |..|.:.|:|..::|..::...|:.|   ||     .|..:...:...|.|.||...::..||||
Mouse    10 KYFLFLFNLLFFILGAVILGFGVWILADKNSFISVLQTSSSSLQVGAYVFIGVGAITIVMGFLGC 74

  Fly    66 FAT---ARVSLGLVWSYVICLLILLCLQIYI-IAAAHSTDYVER----SKKDFLATWADQRTN-- 120
            ...   .|..|||   |.:.||::|..|:.: :....:.|.:::    :..|.:..:....|:  
Mouse    75 IGAVNEVRCLLGL---YFVFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIRNYTANATSSR 136

  Fly   121 VERISLLEQKYSCCGQLGAHDYI----LMG---RGIPLSCYKDQER------------------- 159
            .|....::.:..|||.:..:::.    |||   ...|.||.|.:|.                   
Mouse   137 EEAWDYVQAQVKCCGWVSHYNWTENEELMGFTKTTYPCSCEKIKEEDNQLIVKKGFCEADNSTVS 201

  Fly   160 ----REYSLFSGGCLQAVQAHATDNVAIGLIIKWLLLLVEFAAL 199
                .::.:.:.||::..||...:|..|.|.:...:.::|...|
Mouse   202 ENNPEDWPVNTEGCMEKAQAWLQENFGILLGVCAGVAVIELLGL 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 32/143 (22%)
tetraspanin_LEL 96..180 CDD:239401 19/119 (16%)
Cd82NP_031682.1 Tetraspanin 24..253 CDD:459767 47/225 (21%)
CD37_CD82_like_LEL 106..228 CDD:239413 20/121 (17%)

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