Protein Alignment lbm and Cd82

DIOPT Version :9

• Sequence 1: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_113985.2
• Gene: Cd82 / 83628
• RGDID: 69070
• Length: 266
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 57/261 - (21%)
• Similarity: 98/261 - (37%)
• Gaps: 80/261 - (30%)

  Fly     2 GCATTSVKIASIVL---NAVLGFLAAGAIG---WIAYNAD---------TETEEFVIAAYI---A 48
            ||    ||:....|   |.:...|.|..:|   ||.  ||         |.:....:.||:   .
  Rat     4 GC----VKVTKYFLFLFNLLFFILGAVILGFGVWIL--ADKSSFISVLQTSSSSLQVGAYVFIGV 62

  Fly    49 CSLILVFALLGIFAAIRESVVLTATSAVFLLILAILQIVSTCLFLHEFD---VKSGRDMVEV--- 107
            .::.::...||...|:.|...|.....||||::.|.|:....||....|   .:.|..::::
  Rat    63 GAITMLMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKQEMGNTVMDIIQN 127

  Fly   108 -----------AWQANNMDSLQQKHECCGQSSAQDYIHLSLL-------IPPSCYADLQQ----- 149
                       ||     |.:|.:.:|||..|..::....:|       .|.||....::
  Rat   128 YSVNASSSREEAW-----DYVQAQVKCCGWVSPSNWTRNPVLKNSTKTTYPCSCEKTKEEDNQLI 187

  Fly   150 ----------------TPDH--LYLDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAVFLA 196
                            :|:.  ::.:||:||.|::.:.:   |.|:..|.....:| ..|.:||:
  Rat   188 VKKGFCESDNSTASENSPEDWPVHPEGCMEKAQAWLQEN---FGILLGVCAGVAVI-ELLGLFLS 248

  Fly   197 I 197
            |
  Rat   249 I 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	55/255 (22%)
		tetraspanin_LEL	<109..169	CDD:239401	17/89 (19%)
Cd82	NP_113985.2	Tetraspannin	24..255	CDD:278750	50/237 (21%)
		CD37_CD82_like_LEL	106..228	CDD:239413	21/129 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810