DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbm and TSPAN7

DIOPT Version :10

Sequence 1:NP_523639.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_004606.2 Gene:TSPAN7 / 7102 HGNCID:11854 Length:249 Species:Homo sapiens


Alignment Length:236 Identity:62/236 - (26%)
Similarity:102/236 - (43%) Gaps:53/236 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CATTSVKIASIV--LNAVLGFLAAGAIG------WIAYNADTETEEFVIAAYIAC---SLILVFA 56
            |..|.:.|.|.|  :..|: .||.|..|      :|:..|:..|.    |.|:..   :.|:||.
Human    14 CLKTLLIIYSFVFWITGVI-LLAVGVWGKLTLGTYISLIAENSTN----APYVLIGTGTTIVVFG 73

  Fly    57 LLGIFAAIRESVVLTATSAVFLLILAILQIV---STCLFLHEFD---VKSGRDMVEVAWQANN-- 113
            |.|.||..|.|..:....|:||.::.:.::|   |..:|.||..   :::..|.:: .:..|:  
Human    74 LFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQ-TYNGNDER 137

  Fly   114 ---MDSLQQKHECCGQSSAQDYIHLSLL-------IPPSCYADLQQT---PDHLY---------- 155
               :|.:|:...|||   .|:|.:.|..       |||||.  :.:|   |..|:          
Human   138 SRAVDHVQRSLSCCG---VQNYTNWSTSPYFLEHGIPPSCC--MNETDCNPQDLHNLTVAATKVN 197

  Fly   156 LDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAVFLA 196
            ..||.:.|.||.|::......|::.:...:||...||..|:
Human   198 QKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbmNP_523639.1 Tetraspanin <47..196 CDD:459767 46/182 (25%)
tetraspanin_LEL <109..169 CDD:239401 22/84 (26%)
TSPAN7NP_004606.2 Tetraspanin 15..239 CDD:459767 61/235 (26%)
TM4SF2_6_like_LEL 110..213 CDD:239414 27/108 (25%)

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