Protein Alignment lbm and Tspan1

DIOPT Version :9

• Sequence 1: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_598442.1
• Gene: Tspan1 / 66805
• MGIID: 1914055
• Length: 240
• Species: Mus musculus
• Alignment Length: 231
• Identity: 52/231 - (22%)
• Similarity: 96/231 - (41%)
• Gaps: 62/231 - (26%)

  Fly     5 TTSVKIASIVLNAVLGF-------LAAGAIGWI-----AYNADTETEEFVIAAYIACSLILVFAL 57
            |:.:|:...:.::.:.|       :||||:.:|     .|.|.:|.:         |.|::.|::
Mouse    37 TSFLKVFGSLSSSAMQFVNVGYFLIAAGAVLFILGFLGCYGAHSENK---------CVLMMFFSI 92

  Fly    58 LGI-----FAAIRESVVLTATSAVFLLILAILQIVSTCLFLHEFDVKSGRDMVEVAWQANNMDSL 117
            |.|     .|....::|.|..:..||.:|.:..|        |.|.....|..:| |..    ::
Mouse    93 LLIIFIAEIAGAVVALVYTTLAEQFLTLLVVPAI--------EKDYGYQTDFTQV-WNT----TM 144

  Fly   118 QQKHECCGQSSAQD-----YIHLSLLIPPSCYADLQQTPDHLYLDGCIE------KVQSFYESDK 171
            ::.| |||.::..|     ::..:.:.||.|.|:    |.:..::.|.|      |||..::...
Mouse   145 EELH-CCGFNNYTDFNASRFVKENKVFPPPCCAN----PGNHTVEPCTEEKAKSMKVQGCFKEIL 204

  Fly   172 LRF----IIVSWVLV---AFELICFALAVFLAISFK 200
            .|.    :.|..|.|   |.||....::::|..:.|
Mouse   205 HRIRANAVTVGGVAVGVAALELAAMVVSMYLYCNLK 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	50/224 (22%)
		tetraspanin_LEL	<109..169	CDD:239401	16/70 (23%)
Tspan1	NP_598442.1	Tetraspannin	7..235	CDD:366035	50/224 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810