Protein Alignment lbm and tspan3b

DIOPT Version :10

• Sequence 1: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001076335.1
• Gene: tspan3b / 569864
• ZFINID: ZDB-GENE-070424-42
• Length: 253
• Species: Danio rerio
• Alignment Length: 237
• Identity: 63/237 - (26%)
• Similarity: 92/237 - (38%)
• Gaps: 50/237 - (21%)

  Fly     1 MG-CATTSVKIASIVLN----AVLGFLA-AGAIGWIAYN------ADTETEEFVIAAYIAC--SL 51
            || |...|.|...:.||    |..|.|. .||..:|.|:      .|..|  |:.|..|..  :|
Zfish     1 MGQCGVISSKTVLVFLNLIFWAAAGILCYIGAYVFITYDDYDHFFEDIYT--FIPAMVIIAVGTL 63

  Fly    52 ILVFALLGIFAAIRES-VVLTATSAVFLLILAILQIVSTCLFLH----EFDVKSGRDMVEVAWQA 111
            :.|...:|..|.|||| ..|...|||.||:.|...:|....:::    |..|......|...::.
Zfish    64 LFVIGFIGCCATIRESRCGLVTFSAVLLLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYNEYKG 128

  Fly   112 NNMDS-------LQQKHECCGQSSAQDYIHLSLLI-------PPSC-------YADLQQTPDHLY 155
            .|.|:       :|::..|||..:..|:::....|       |.||       .......|..||
Zfish   129 TNTDAPSRAIDYVQRQLHCCGIHNYSDWMNTHWFIESKNNSVPVSCCKPTISNRTGTLMRPGDLY 193

  Fly   156 LDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAVFLAI 197
            .:||...|..     ||:.|::..:|.|   :.||....|.:
Zfish   194 PEGCEVLVVK-----KLKDIMLYVILAA---LTFAAIQMLGL 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	44/176 (25%)
		tetraspanin_LEL	<109..169	CDD:239401	17/80 (21%)
tspan3b	NP_001076335.1	Tetraspanin	9..235	CDD:459767	59/229 (26%)
		TM4SF8_like_LEL	104..209	CDD:239416	22/109 (20%)