DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbm and tspan31

DIOPT Version :10

Sequence 1:NP_523639.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_956575.1 Gene:tspan31 / 393251 ZFINID:ZDB-GENE-040426-1123 Length:212 Species:Danio rerio


Alignment Length:214 Identity:45/214 - (21%)
Similarity:94/214 - (43%) Gaps:37/214 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATTSVKIASIVLNAVLGFLAAGAIGWIAYNADTETEEFVIAAYIACSLIL-VFALLGIFAAIRES 67
            |..|:.:..:::..:|..:||...|:     ...:...:|...||....| :.|::|:..|:...
Zfish    12 ALCSLNVVYMLVGLLLIVVAAWGKGF-----GIVSSIHIIGGVIAVGFFLQLIAIVGLIGAVHHH 71

  Fly    68 VVLTATSAVFLLILAILQ--IVSTCLFLHEFDVKSGRDMVEVAWQANNMD---SLQQKHECCGQS 127
            .|:.....|.|.::.:.|  :..:||.:::...:.   ::|.:|:..:.|   ||::|.:|||  
Zfish    72 QVMLFFYMVILFVVFLFQFGVSCSCLAMNQGQQEK---LLESSWKIMSNDTRISLEKKLDCCG-- 131

  Fly   128 SAQDYIHLSLLIPPSCYADLQQTPDHLYLDGCIEKVQSF--------YESDKLRFIIVSWVLVAF 184
                 :..|..:.....:||     ||....|.:|.:..        |.|:.|:.:....:..:|
Zfish   132 -----LFNSTNLQADIMSDL-----HLCTSPCTQKKECVTCGPKMLQYSSEALKILGGVGLFFSF 186

  Fly   185 ELICFALAVFLAISFKNKQ 203
            ..|   |.|:||:.::|::
Zfish   187 TEI---LGVWLAMRYRNQK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbmNP_523639.1 Tetraspanin <47..196 CDD:459767 35/162 (22%)
tetraspanin_LEL <109..169 CDD:239401 16/70 (23%)
tspan31NP_956575.1 Tetraspanin 9..198 CDD:459767 44/208 (21%)

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