Protein Alignment lbm and TM4SF

DIOPT Version :9

• Sequence 1: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001261159.1
• Gene: TM4SF / 37786
• FlyBaseID: FBgn0020372
• Length: 292
• Species: Drosophila melanogaster
• Alignment Length: 248
• Identity: 65/248 - (26%)
• Similarity: 100/248 - (40%)
• Gaps: 69/248 - (27%)

  Fly    13 IVLNAVLG----FLAAGAI-GWIAYNADTETEEFVIAAYIAC----SLILVF-----------AL 57
            :||.|:.|    ||....: |...|....:.:.:..||.:.|    :.||.:           .|
  Fly    18 VVLLALTGAAQIFLGTSLLWGHSVYYGIVQNKLWAPAAILLCLGPVTFILCWMGCQATNQRKRCL 82

  Fly    58 LGIFAAIRESVVLTATSAVFLLI----LAILQIVSTC--LFLH----EFDVKSGRDMVEVAWQAN 112
            ||:|||:     |.|...|..:|    ||:.:.:.|.  :|:.    ||..|..|..|:.....|
  Fly    83 LGMFAAL-----LVACICVQFIICGWSLAMRENLPTSVEIFIDDSFVEFLDKFSRTKVDNLHLWN 142

  Fly   113 NMDSLQQKHECCGQSSAQDYIHLSLLIPPSCYADLQQTPDHLYLD--------GCIEKVQSFYES 169
            .|   |.:.:|||.....||..|||  |.||.:    .|:|.|..        ||:..|.   |.
  Fly   143 RM---QSQLQCCGVDGPLDYRRLSL--PWSCCS----RPEHAYESACDTHYKRGCLAVVS---EQ 195

  Fly   170 DKLRFIIVSW---VLVAFELICFALAVFLAISF-KN----------KQRRMEF 208
            .:.|.:|.::   ::..|:.:....||.|.|.| ||          |:::.:|
  Fly   196 IRNRLLITAFGAAIIAIFQSLGIFCAVHLTILFGKNDNTHPMNMNRKKKQQQF 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	59/225 (26%)
		tetraspanin_LEL	<109..169	CDD:239401	20/67 (30%)
TM4SF	NP_001261159.1	Tetraspannin	9..224	CDD:278750	58/222 (26%)
		uroplakin_I_like_LEL	111..197	CDD:239409	28/97 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR19282
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910