Protein Alignment lbm and Upk1a

DIOPT Version :10

• Sequence 1: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_063125186.1
• Gene: Upk1a / 365227
• RGDID: 1309849
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 44/212 - (20%)
• Similarity: 74/212 - (34%)
• Gaps: 82/212 - (38%)

  Fly    24 AGAIGWIAYNADTETEEFVIAAYIACSL-ILVFALLGIFAAI--RESVVLTATSAVFLLILAILQ 85
            |||  |||               |.|.. ..|.|..|:.||:  |..::||     :||::.|:.
  Rat    63 AGA--WIA---------------IFCGFSFFVVASFGVGAALCRRRYMILT-----YLLLMLIVY 105

  Fly    86 I--VSTC---------------------LFLHEFDVKSGRDMVEVAWQANNMDSLQQKHECCGQS 127
            |  .::|                     |..:..|...|:::..: |     |.:..:.||||.|
  Rat   106 IFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTRL-W-----DRIMIEQECCGTS 164

  Fly   128 SAQDYIHLSLLI-----------PPSC------YADLQQT------PDHLYLDGCIEKVQSFYES 169
            ...|:::.:...           ||.|      :..:.:.      .|:|:..||.|.:....:|
  Rat   165 GPMDWVNYTSAFRAATPEVVFPWPPLCCRRTGNFIPINEDGCRVGHMDYLFTKGCFEHISHAIDS 229

  Fly   170 -----DKLRFIIVSWVL 181
                 ....|.|:.|.:
  Rat   230 YTWGISWFGFAILMWTV 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	38/189 (20%)
		tetraspanin_LEL	<109..169	CDD:239401	16/82 (20%)
Upk1a	XP_063125186.1	None