Protein Alignment lbm and Tsp42El

DIOPT Version :10

• Sequence 1: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_523638.1
• Gene: Tsp42El / 35622
• FlyBaseID: FBgn0033134
• Length: 217
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 73/224 - (32%)
• Similarity: 111/224 - (49%)
• Gaps: 23/224 - (10%)

  Fly     1 MGCATTSVKIASIVLN---AVLGFLAA--GAIGWIAYNADTETEEFVIAAYIACSLILVFALLGI 60
            |||||.::|.:..:.|   |:||.|..  |.:||.|.     .:.:.|...|....|||.:|.|.
  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAM-----PDAYAIGILILGGTILVISLFGC 60

  Fly    61 FAAIRESVVLTATSAVFLLILAILQIVSTCLFLHEFDV--KSGRDMVEVAWQ-----ANNMDSLQ 118
            ..|:|||..:..|.|..||||.:|  :...:.|:..||  |.....||..|:     ..:||.:|
  Fly    61 CGAVRESPRMLWTYASLLLILLLL--IVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMDIIQ 123

  Fly   119 QKHECCGQSSAQDYIHLSL---LIPPSCYADLQ-QTPDHLYLDGCIEKVQSFYESDKLRFIIVSW 179
            :.:.|||:.|||||:.:..   .:|.||..|.. ..|.:||:.||:.||:..:..:......:.|
  Fly   124 KTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLGYLEW 188

  Fly   180 VLVAFELICFALAVFLAISFKNKQRRMEF 208
            .|:.|..:...||:.|||.:.|::||..:
  Fly   189 GLLGFNAVILLLAIILAIHYTNRRRRYNY 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	51/159 (32%)
		tetraspanin_LEL	<109..169	CDD:239401	23/68 (34%)
Tsp42El	NP_523638.1	Tetraspanin	8..>130	CDD:459767	39/128 (30%)
		tetraspanin_LEL	94..178	CDD:239401	28/83 (34%)