Protein Alignment lbm and Tspan17

DIOPT Version :10

• Sequence 1: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 256
• Identity: 57/256 - (22%)
• Similarity: 96/256 - (37%)
• Gaps: 78/256 - (30%)

  Fly     1 MGCATTSVKIASIVLNAVLG--FLAAGAIGW----IAYNADTETE--------EFVIAAYIACSL 51
            :||..........::..|||  |||.|...|    :..|....|:        .||:..    .:
  Rat    13 VGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGLTDLGGLDPVWLFVVIG----GI 73

  Fly    52 ILVFALLGIFAAIRESVVLTATSAVFLLILAILQIVSTC--------------LFLHEFDVKSGR 102
            :.|....|...|:||:..|....:|||.::..|::.:..              ||::. :||:.|
  Rat    74 MSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINN-NVKAYR 137

  Fly   103 DMVEVAWQANNMDSLQQKHECCGQSSAQD-----YIHLSLL--------IPPSCYA--------- 145
            |.:::   .|.:|..|:...|||.....|     |.:.:.|        :|.||..
  Rat   138 DDIDL---QNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLN 199

  Fly   146 -----------DLQQTPDHLYLDGCIEKVQSFYESDKLRFIIVSWVLVAFEL-----ICFA 190
                       :|:| ...:|..||:.:.:.:.:.:   .|:|:.||||..|     ||.|
  Rat   200 TQCGYDIRLKLELEQ-QGSIYTKGCVGQFEKWLQDN---LIVVAGVLVAIALLQICGICLA 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	43/196 (22%)
		tetraspanin_LEL	<109..169	CDD:239401	17/92 (18%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	55/251 (22%)
		TM4SF9_like_LEL	115..235	CDD:239412	23/127 (18%)