Protein Alignment lbm and Tspan1

DIOPT Version :9

• Sequence 1: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 243
• Identity: 48/243 - (19%)
• Similarity: 98/243 - (40%)
• Gaps: 58/243 - (23%)

  Fly     8 VKIASIVLNAVLGFLAAG--AIG-WIAYNA----------DTETEEFVIAAYI---ACSLILVFA 56
            :|:..|:.|.::....|.  |:| |::.:.          .:...:||...|.   |.:::.:..
  Rat     7 IKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLSSSAMQFVNVGYFLIAAGAVLFILG 71

  Fly    57 LLGIFAAIRES-VVLTATSAVFLLIL------AILQIVSTCL---FLH-------EFDVKSGRDM 104
            .||.:.|..|: .||....::.|:|.      |::.:|.|.:   ||.       |.|.....:.
  Rat    72 FLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTMAEQFLTFLVVPAIEKDYGYQTEF 136

  Fly   105 VEVAWQANNMDSLQQKHECCGQSSAQD-----YIHLSLLIPPSCYADLQQTPDH----------- 153
            .:| |. :.|:.|    .|||.::..|     ::..:.:.||.|.|:  .|..|
  Rat   137 TQV-WN-STMEGL----HCCGFNNYTDFNSSRFVKENKVFPPFCCAN--NTDSHTVEPCTEDKAK 193

  Fly   154 -LYLDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAVFLAISFK 200
             :.:.||.:::.....::.:....|:..:.|.||....::::|..:.|
  Rat   194 SMNVQGCFKQILQKIRTNAVTVGGVAVGVAALELAAMVVSMYLYCNLK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	47/239 (20%)
		tetraspanin_LEL	<109..169	CDD:239401	15/76 (20%)
Tspan1	NP_001004236.1	Tetraspannin	7..236	CDD:395265	46/236 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810