Protein Alignment lbm and Tspan4

DIOPT Version :9

• Sequence 1: NP_001260757.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: XP_038963951.1
• Gene: Tspan4 / 293627
• RGDID: 1305810
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 233
• Identity: 50/233 - (21%)
• Similarity: 89/233 - (38%)
• Gaps: 49/233 - (21%)

  Fly     2 GCATTSVKIASIVLNAVLGFLAAGAIG---WIAY---NADTETEEF--VIAA---YIACSLILVF 55
            || ...||......|.:......|.:|   |:|.   |..|.:..|  :.||   .:..:.::..
  Rat    99 GC-LQGVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGNFATLSSSFPSLSAANLLIVTGTFVMAI 162

  Fly    56 ALLGIFAAIRESVVLTATSAVFLLILAILQIVSTCLFL---------HEFDVKSGRDM------- 104
            ..:|...|::|:..|..|..|.||::.:|:.....||.         .:.|:|.|..:
  Rat   163 GFVGCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYGTEGNV 227

  Fly   105 -VEVAWQANNMDSLQQKHECCGQSSAQDY--IHLSLLIPPSCYADLQQT-----PDHLYLDGCIE 161
             :..||..     :|....|||.|:..|:  ::.:..:|.||..:...:     |...:...|.|
  Rat   228 GLTNAWSI-----IQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSDSCGLHEPGTWWKSPCYE 287

  Fly   162 KVQSFYESDKLRFIIVSWVLVAFELICFALAVFLAISF 199
            .|:::.:.:.|...|..        :|.||...|.::|
  Rat   288 TVKAWLQENLLAVGIFG--------LCTALVQILGLTF 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_001260757.1	Tetraspannin	8..198	CDD:278750	47/224 (21%)
		tetraspanin_LEL	<109..169	CDD:239401	14/66 (21%)
Tspan4	XP_038963951.1	Tetraspannin	104..321	CDD:395265	48/227 (21%)
		NET-5_like_LEL	200..297	CDD:239418	18/101 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900