Protein Alignment lbm and Cd53

DIOPT Version :10

• Sequence 1: NP_523639.1
• Gene: lbm / 35623
• FlyBaseID: FBgn0016032
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_036655.1
• Gene: Cd53 / 24251
• RGDID: 2310
• Length: 219
• Species: Rattus norvegicus
• Alignment Length: 219
• Identity: 51/219 - (23%)
• Similarity: 87/219 - (39%)
• Gaps: 61/219 - (27%)

  Fly     2 GCATTSVKIASIVLNAV------LGFLAAGAIGWIAYNADTETEEFVIAAYIACSLILVFALLGI 60
            ||......|..:|.|..      |.||..|.:                 ..|..|:|:|.|.||.
  Rat    24 GCCILGFGIHLLVQNTYGILFRNLPFLTLGNV-----------------LVIVGSIIMVVAFLGC 71

  Fly    61 FAAIRESVVLTATSAVFLLILAILQI-VSTCLFLHEFDVKS--------------GRDMVEVAWQ 110
            ..:|:|:..|..:..|.||::.:.:: ::..||::|..:.:              ..:...:||
  Rat    72 MGSIKENKCLLMSFFVLLLLILLAEVTLAILLFVYEKKINTLVAEGLNDSIQHYHSDNSTRMAW- 135

  Fly   111 ANNMDSLQQKHECCGQSSAQDYIHLSLLIPPSCYADLQQTPDHLYLDGCIEKVQSFYESDKLRFI 175
                |.:|.:.:|||.:.:.|:|...   |.||       |....:.||.:|.|:::.|:.|...
  Rat   136 ----DFIQSQLQCCGVNGSSDWISGP---PSSC-------PSGADVQGCYKKGQAWFHSNFLYIG 186

  Fly   176 IVSWVLVAFELICFALAVFLAISF 199
            ||:        ||..:...|.:||
  Rat   187 IVT--------ICVCVIQVLGMSF 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbm	NP_523639.1	Tetraspanin	<47..196	CDD:459767	39/163 (24%)
		tetraspanin_LEL	<109..169	CDD:239401	16/59 (27%)
Cd53	NP_036655.1	Tetraspanin	9..208	CDD:459767	51/219 (23%)
		CD53_like_LEL	104..186	CDD:239417	21/96 (22%)