DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbm and LOC1269922

DIOPT Version :10

Sequence 1:NP_523639.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_001688006.1 Gene:LOC1269922 / 1269922 VectorBaseID:AGAMI1_005687 Length:229 Species:Anopheles gambiae


Alignment Length:229 Identity:65/229 - (28%)
Similarity:111/229 - (48%) Gaps:29/229 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATTSVKIASIVLNAV-----LGFLAAGAIGWIAYNADTE-TEEFVIAA-----YIACSLILV 54
            :.|..:::|....:.|.:     :..:..||:..:......| ::|:.|.|     .:..|::.|
Mosquito     3 LNCGHSTIKYLLFIFNLLCSLCGIALIVIGAVSLVKLEELREISDEYNIVAPSILLIVFGSVVFV 67

  Fly    55 FALLGIFAAIRESVVLTATSAVFLLILAILQIV-STCLFLHEFDV----KSGRDMV----EVAWQ 110
            .:..|...|||||..:|:|.:.||::|.|.||| :..:|:...||    |.|.:.|    :....
Mosquito    68 ISFFGCCGAIRESYCMTSTYSFFLILLVIAQIVIAVLVFVFVGDVTTAIKKGFERVFENRDNPVN 132

  Fly   111 ANNMDSLQQKHECCGQSSAQDYIHLSLLIPPSCYADLQQTPDHL-YLDGCIEKVQSFYESDKLRF 174
            |:.::|:||..:|||:.|..||...|  .|.||.:.....|..: :..||:.::..|.:|   ..
Mosquito   133 ADLVNSIQQNLQCCGKRSFLDYGVAS--FPQSCCSSGGTAPLCVPFASGCLSRLSEFLDS---AG 192

  Fly   175 IIVSWV---LVAFELICFALAVFLAISFKNKQRR 205
            .||:||   :.|.||:....|..||.:.:|:|||
Mosquito   193 NIVAWVSLGVAAVELVGLISACCLANAIRNQQRR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbmNP_523639.1 Tetraspanin <47..196 CDD:459767 50/161 (31%)
tetraspanin_LEL <109..169 CDD:239401 18/60 (30%)
LOC1269922XP_001688006.1 Tetraspanin 10..218 CDD:459767 59/212 (28%)

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