DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbm and TSPAN5

DIOPT Version :10

Sequence 1:NP_523639.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_005714.2 Gene:TSPAN5 / 10098 HGNCID:17753 Length:268 Species:Homo sapiens


Alignment Length:229 Identity:45/229 - (19%)
Similarity:87/229 - (37%) Gaps:66/229 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FLAAGAIGW----IAYNADTETE----EFVIAAYIACSLILVFALLGIFAAIRESVVLTATSAVF 77
            ||..|...|    :..|..:.|:    :.|....:...::.:....|...|:||:..|....:||
Human    33 FLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVF 97

  Fly    78 LLILAILQIVSTCL-------------FLHEFDVKSGRDMVEVAWQANNMDSLQQKHECCGQSSA 129
            |.|:..|::.:..|             |....::::.||.:::   .|.:|..|:..:|||...|
Human    98 LGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDL---QNLIDFTQEYWQCCGAFGA 159

  Fly   130 QDYIHLSLL--------------IPPSCYA--------------DLQQTPD-----HLYLDGCIE 161
            .|: :|::.              :|.||..              |.:|.|:     .:|..||:.
Human   160 DDW-NLNIYFNCTDSNASRERCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVP 223

  Fly   162 KVQSFYESDKLRFIIVSWVLVAFEL-----ICFA 190
            :.:.:.:.:   ..||:.:.:...|     ||.|
Human   224 QFEKWLQDN---LTIVAGIFIGIALLQIFGICLA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbmNP_523639.1 Tetraspanin <47..196 CDD:459767 38/195 (19%)
tetraspanin_LEL <109..169 CDD:239401 18/92 (20%)
TSPAN5NP_005714.2 Tetraspanin 15..258 CDD:459767 45/229 (20%)
TM4SF9_like_LEL 113..233 CDD:239412 21/126 (17%)

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