DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and TSPAN4

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001426622.1 Gene:TSPAN4 / 7106 HGNCID:11859 Length:330 Species:Homo sapiens


Alignment Length:229 Identity:63/229 - (27%)
Similarity:105/229 - (45%) Gaps:43/229 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGLG-W------------GAMPDAYAIGILIL-GGTILVISLF 58
            :||.:|.||.|:.:.|..||   |:| |            .:.|...|..:||: |..::.|...
Human   101 VKYLMFAFNLLFWLGGCGVL---GVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGFV 162

  Fly    59 GCCGAVRESPRMLWTYASLLLILLLL--IVAFIILNPKDVFKKYALQTVENQWELEQTK-----P 116
            ||.||::|:..:|.|:..|||::.||  .:|.:.....|...:||.|.::....|..|:     .
Human   163 GCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLT 227

  Fly   117 GSMDIIQKTYYCCGRDSAQDYLDIKFWNNT-VPSSCCKD--DSCVNPLNLYVRG------CLIKV 172
            .:..|||..:.|||..:..|:.::  :|.| ||.|||.:  :||    .|:..|      |...|
Human   228 NAWSIIQTDFRCCGVSNYTDWFEV--YNATRVPDSCCLEFSESC----GLHAPGTWWKAPCYETV 286

  Fly   173 EEAFADEATTLGYLEWGLLGFNAVILLLAIILAI 206
            :....:....:|.  :||.  .|::.:|.:..|:
Human   287 KVWLQENLLAVGI--FGLC--TALVQILGLTFAM 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 41/142 (29%)
tetraspanin_LEL 94..178 CDD:239401 26/97 (27%)
TSPAN4NP_001426622.1 None

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