DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tspan2

DIOPT Version :9

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:234 Identity:59/234 - (25%)
Similarity:107/234 - (45%) Gaps:55/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGLGW----GAM---------PDAYAIGILIL---GGTILVIS 56
            |||.|..||.|:.:.|..|:.||  .|    |.|         |:.:.:|:.:|   |..::.:.
Mouse    11 IKYLLLGFNLLFWLAGSAVIAFG--LWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGALMMTVG 73

  Fly    57 LFGCCGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVENQWE------ 110
            .||||||:|||..:|.::.:.||::...     :.|||   .|||    |::.|::.:|      
Mouse    74 FFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFI---GKDV----AIRHVQSMYEEAYSDY 131

  Fly   111 LEQTKPGSMDII--QKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVE 173
            |:....|:..:|  ...:.|||::|::.          |..:|.|:    .|.:   :.|:.|:|
Mouse   132 LKDRARGNGTLITFHSAFQCCGKESSEQ----------VQPTCPKE----LPGH---KNCIDKIE 179

  Fly   174 EAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRR 212
            ...:.:...:|.:..|:.|.....::.:::|.....|.|
Mouse   180 TVISAKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspannin 7..196 CDD:278750 56/216 (26%)
tetraspanin_LEL 94..178 CDD:239401 20/91 (22%)
Tspan2NP_081809.2 Tetraspannin 10..214 CDD:278750 57/228 (25%)
CD81_like_LEL 110..186 CDD:239404 22/99 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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