DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tspan2

DIOPT Version :9

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_072111.1 Gene:Tspan2 / 64521 RGDID:620982 Length:221 Species:Rattus norvegicus


Alignment Length:234 Identity:56/234 - (23%)
Similarity:105/234 - (44%) Gaps:55/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGLGW----GAM---------PDAYAIGILIL---GGTILVIS 56
            |||.|..||.|:.:.|..|:.||  .|    |.:         |:.:.:|:.:|   |..::.:.
  Rat    11 IKYLLLGFNLLFWLAGSAVIAFG--LWFRFGGTIKDLSSEEKSPEYFYVGLYVLVGAGALMMAVG 73

  Fly    57 LFGCCGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVENQWELEQTK- 115
            .||||||:|||..:|.::.:.||::...     :.|||   .|||    |::.|::.:|...:. 
  Rat    74 FFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFI---GKDV----AIRHVQSMYEEAYSDY 131

  Fly   116 -------PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVE 173
                   .|::......:.|||::|::.          |..:|.|:    .|.:   :.|:.|:|
  Rat   132 VRDRGRGNGTLITFHSAFQCCGKESSEQ----------VQPTCPKE----LPGH---KNCIDKIE 179

  Fly   174 EAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRR 212
            ...:.:...:|.:..|:.|.....::.:::|.....|.|
  Rat   180 TIISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspannin 7..196 CDD:278750 53/216 (25%)
tetraspanin_LEL 94..178 CDD:239401 18/91 (20%)
Tspan2NP_072111.1 Tetraspannin 10..214 CDD:278750 54/228 (24%)
CD81_like_LEL 110..186 CDD:239404 20/99 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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