DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tspan33b

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_005159085.1 Gene:tspan33b / 567512 ZFINID:ZDB-GENE-060503-607 Length:266 Species:Danio rerio


Alignment Length:245 Identity:61/245 - (24%)
Similarity:105/245 - (42%) Gaps:68/245 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFG-----GLGWGAMPDAY----AIGILILGGTILVISLFGCCGA 63
            |:|.||.|:.|:.:..:|::..|     ......:.|::    |:.::::|..:..|:..||.||
Zfish    20 IRYFLFFFSFLFWVFSLLIVAIGVYAKAQKATDTVRDSFLIDPAVILIVVGVVMFFITFCGCIGA 84

  Fly    64 VRESPRMLWTYASLLLILLLLIVAFIIL------NPKDV---FKKYALQTVENQWELEQTKPGSM 119
            :||:.|:|..::..|.::.|..:|..||      ..:|.   |.|.|:....:..:|:..    |
Zfish    85 LRENIRLLKIFSFSLTLVFLTQMAIAILGFFYSEQTRDALGEFVKKAIVHYRDDLDLQNL----M 145

  Fly   120 DIIQKTYYCCGRDSAQDYLDIKFWNN--------------TVPSSCCKD---DSCVNPL------ 161
            |.|||.:.|||..:..|:    .||.              :||.|||..   ::.:|.:      
Zfish   146 DYIQKEFKCCGWTNYTDW----SWNPYFNCSSSNPSNERCSVPFSCCTPLPRETVINSMCGFGIQ 206

  Fly   162 ---------NLYVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAI 202
                     ::|..||        ||.|..  ::|..||.|.|:.|.||:
Zfish   207 TQNHLNATKSIYSVGC--------ADRAVI--WIESHLLLFGALTLGLAL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 36/139 (26%)
tetraspanin_LEL 94..178 CDD:239401 25/118 (21%)
tspan33bXP_005159085.1 Tetraspanin 36..>156 CDD:459767 30/123 (24%)
penumbra_like_LEL 114..234 CDD:239411 29/137 (21%)

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