DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tspan9a

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_073785985.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:249 Identity:69/249 - (27%)
Similarity:116/249 - (46%) Gaps:48/249 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCATGTIKYSLFLFNALWAILGILVLIFGGLG-W------------GAMPDAYAIGILI-LGGTI 52
            ||.. .:||.:|:||.::.:.|..:|   |:| |            .:.|...|..::| :|..:
Zfish   101 GCLC-CLKYMMFVFNLIFWLCGCGLL---GVGIWLSVSQGSFATFSPSFPSLSAANMVIAIGAIV 161

  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLL----LIVAFIILNPK-------DVFKKYALQTVE 106
            :|....||.||::|:..:|.::..:|||:||    |::.|.:.:.|       |:....||...:
Zfish   162 MVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYSDKVSENAKQDLKDGLALYNTD 226

  Fly   107 NQWELEQTKPGSMDIIQKTYYCCGRDSAQDYLD-IKFWNNTVPSSCCKD--DSC-VNPLNLY-VR 166
            |...|.    .:.:|||..:.|||.....|:.| :|  ...||..||::  ..| .|..|:: .|
Zfish   227 NNIGLR----NAWNIIQAEWKCCGVTGYTDWHDALK--EKVVPDRCCQEHYQECGRNSTNMFWTR 285

  Fly   167 GCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILAI---HYTNRR-RRYN 216
            ||..||||...|....||.:...:|    |:.||.:..::   |..:|. ::|:
Zfish   286 GCYEKVEEWLEDNKHLLGTIGMCIL----VVQLLGMAFSMTLFHQIHRSGKKYD 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 38/146 (26%)
tetraspanin_LEL 94..178 CDD:239401 29/95 (31%)
tspan9aXP_073785985.1 None

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