DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tspan14

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:249 Identity:53/249 - (21%)
Similarity:101/249 - (40%) Gaps:62/249 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYSLFLFNALWAILGILVLIFGGLGW---GAMPDAYAIG----------ILILGGTILVISLFGC 60
            ||.||.:|.::.:.|:::|..|...|   |.:.|...:.          :|::|..:..:...||
 Frog    16 KYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFDPVWLVLVVGVIMFTLGFAGC 80

  Fly    61 CGAVRESPRMLWTYASLLLILLLLIVAFIIL----------NPKDVFKKYALQTVENQWELEQTK 115
            .||:||:..:|..:...::::..:.:|..:|          ..||.|:. .:::..:..:|:.. 
 Frog    81 VGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFEN-NIKSYRDDIDLQNL- 143

  Fly   116 PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNT-----------VPSSCCKDD---SCVN------- 159
               :|.:||...|||..|..|: |:..:.|.           ||.|||..|   :.||       
 Frog   144 ---IDSLQKANQCCGAVSPDDW-DLNEYFNCSVENPSRERCGVPFSCCVPDPAQTVVNTQCGYDA 204

  Fly   160 --------PLNLYVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILA 205
                    |...:.:||:..:|.......    |:..|:....:::.:..|.||
 Frog   205 RRKKPNERPNTTFSKGCISALEAWLPRNI----YIVAGVFLVISILQIFGIYLA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 30/143 (21%)
tetraspanin_LEL 94..178 CDD:239401 26/112 (23%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 53/249 (21%)
TM4SF9_like_LEL 113..233 CDD:239412 26/125 (21%)

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