DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tspan4a

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_073785120.1 Gene:tspan4a / 436620 ZFINID:ZDB-GENE-040718-38 Length:321 Species:Danio rerio


Alignment Length:236 Identity:62/236 - (26%)
Similarity:110/236 - (46%) Gaps:46/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCATGTIKYSLFLFNALWAILGILVLIFGGLG-W------------GAMPDAYAIGILILGGT-I 52
            ||.. .::|.:..||.|:.:.|..:|   |:| |            .::|...|..:||..|| :
Zfish    86 GCLR-ALRYGMVFFNLLFWLCGCGIL---GVGVWLSITQGNFATLSSSLPSLSAANLLIAAGTVV 146

  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLLLIVAFIIL--NPKDVFKKYALQTVENQWELEQTK 115
            :||...||.|||:|:..:|.::..|||::.||.:.||||  :.:|....||...::...:|..|:
Zfish   147 MVIGCLGCVGAVKENRPLLLSFFILLLLIFLLEILFIILFFSYQDQIDLYAQNDLKKGLQLFGTE 211

  Fly   116 -----PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKD--DSC--VNPLNLYVRGCLIK 171
                 ..:..|:|..:.|||..:..|:..: :..:.||.|||.:  |:|  .||...:...|..:
Zfish   212 GNIGLTNAWSIVQTDFRCCGVTNHTDWFQV-YNTSRVPDSCCLEYSDNCGLENPGTWWTAPCYER 275

  Fly   172 VEEAFADEATTLGYLEWGLLGF------NAVILLLAIILAI 206
            |:          |:|:..|:..      .|:..:|.::.::
Zfish   276 VK----------GWLQENLVALWIFALCTALTQILGLVFSM 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 41/142 (29%)
tetraspanin_LEL 94..178 CDD:239401 22/92 (24%)
tspan4aXP_073785120.1 None

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