DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tspan9b

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_068075684.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:337 Species:Danio rerio


Alignment Length:244 Identity:67/244 - (27%)
Similarity:111/244 - (45%) Gaps:44/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCATGTIKYSLFLFNALWAILGILVLIFGGLG-W------------GAMPDAYAIGILI-LGGTI 52
            ||.. .:||.:||||.|:.:.|..:|   |:| |            .:.|...|..::| ||..:
Zfish   102 GCLC-CVKYMMFLFNLLFWLSGCGLL---GVGIWLSVSQGSFATFSPSFPSLSAANLVITLGSVV 162

  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLL----LIVAFIILNPKDVFKKYALQTVENQWELEQ 113
            :|....||.||::|:..:|.::..:|||:||    |::.|.:...|  ..:.|.|.:::...|..
Zfish   163 MVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEK--VSENAKQDLKDGLRLYN 225

  Fly   114 TK-----PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKD--DSC-VNPLNLY-VRGCL 169
            |.     ..:.:|||..:.|||.....|:.: .....:||..||::  ..| .|..|:: .:||.
Zfish   226 TDNNVGLRNAWNIIQAEWQCCGVTGLSDWHE-ALQEKSVPDRCCQEHYTECGRNTTNVFWSQGCY 289

  Fly   170 IKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILA------IHYTNRR 212
            .||||...|....||.:...:|    |:.||.:..:      ||...::
Zfish   290 EKVEEWLNDNKHLLGTIAMCVL----VLQLLGMAFSMTLYQQIHRAGKK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 40/144 (28%)
tetraspanin_LEL 94..178 CDD:239401 25/92 (27%)
tspan9bXP_068075684.1 Tetraspanin 107..326 CDD:459767 63/228 (28%)
NET-5_like_LEL 203..300 CDD:239418 26/99 (26%)

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