DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tspan31

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:220 Identity:48/220 - (21%)
Similarity:99/220 - (45%) Gaps:45/220 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYSLFLFNALWAILGILVL--IFGGLGWGAMPDAYAI-GILILGGTILVISLFGCCGAVRESPRM 70
            |.:|...|.::.::|:|::  ...|.|.|.:...:.| |::.:|..:|:|::.|..|||.....:
  Rat    10 KNALCALNVVYMLVGLLLIGVAAWGKGLGVVSSIHIIGGVIAVGVFLLLIAVAGLVGAVNHHQVL 74

  Fly    71 LWTYASLLLILLLLIVAF------IILN---PKDVFKKYALQTVENQWELEQTKPGSMDIIQKTY 126
            |:.|  ::::.|:.|..|      :.:|   ..||..       .:.|.|..:   :...:::::
  Rat    75 LFFY--MIILGLVFIFQFGISCSCLAINRNTQADVIN-------ASWWVLSNS---TRHELERSF 127

  Fly   127 YCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAF---ADEA-TTLGYLE 187
            .|||   ..:...:...::...|:.||..|  :|..:    |    .|.|   :|:| ..||   
  Rat   128 DCCG---LFNLTTVHLHDDASCSALCKTRS--SPCQM----C----GETFLKHSDKALKILG--- 176

  Fly   188 WGLLGFNAVILLLAIILAIHYTNRR 212
             |:..|.:...:|.:.||:.:.|::
  Rat   177 -GVGLFFSFTEILGVWLAMRFRNQK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 28/132 (21%)
tetraspanin_LEL 94..178 CDD:239401 15/86 (17%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 47/214 (22%)

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