DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp42Eq

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster


Alignment Length:222 Identity:61/222 - (27%)
Similarity:105/222 - (47%) Gaps:9/222 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPDAYAIGI-----LILGGTILVISLFGC 60
            |.|.|..:|.|.|:.:.|..:|..|.:........|...:.||.:     ::|||.:...::|||
  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYALIAFSHSVAIRVPSILGIVLGGLLFFSTIFGC 65

  Fly    61 CGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMDIIQKT 125
            ..|:|||.||.|.||::||.|:...:..|:..|.: ::..|.:|:.:.|:.:......|...:..
  Fly    66 IAALRESIRMTWIYAAILLALVFSQITVILAQPIN-YELLANETIYDAWQGQLYHSDRMSYFEIK 129

  Fly   126 YYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLGYLEWGL 190
            |:|||:....:|.|...   .:|.||..:.:.....:||..||..::..||..........:|.:
  Fly   130 YHCCGQTGPANYPDSGL---VIPQSCYFNQNATVTTDLYTVGCNHQLAAAFVKGTRWEKITDWSV 191

  Fly   191 LGFNAVILLLAIILAIHYTNRRRRYNY 217
            :|...:.:::|.:|||...|..||..|
  Fly   192 VGVEILTVIIAGLLAITLQNAERRRLY 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 35/126 (28%)
tetraspanin_LEL 94..178 CDD:239401 19/83 (23%)
Tsp42EqNP_523643.2 Tetraspanin 8..>134 CDD:459767 35/126 (28%)
tetraspanin_LEL 95..173 CDD:239401 18/81 (22%)

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