DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp42En

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster


Alignment Length:227 Identity:65/227 - (28%)
Similarity:103/227 - (45%) Gaps:19/227 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGW-GAMPDAY---AIGILILGGTILVISLF-GC 60
            |.|.|..:|..|.:.|.|.:::|:.::....... .:.|..:   ||.:.|..||.:|::.| ||
  Fly     1 MDCRTSFLKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGC 65

  Fly    61 CGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVF----KKYALQTVENQWELEQTKPGSMDI 121
            ....|.|..::|:|...|||||.|.:..|.......:    ||..|.|    |..::|....:.:
  Fly    66 FATARVSLGLVWSYVICLLILLCLQIYIIAAAHSTDYVERSKKDFLAT----WADQRTNVERISL 126

  Fly   122 IQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLG-Y 185
            :::.|.|||:..|.||:   .....:|.||.||.. ....:|:..|||..| :|.|.:...:| .
  Fly   127 LEQKYSCCGQLGAHDYI---LMGRGIPLSCYKDQE-RREYSLFSGGCLQAV-QAHATDNVAIGLI 186

  Fly   186 LEWGLLGFNAVILLLAIILAIHYTNRRRRYNY 217
            ::|.||......|..|..|.|...|:.||..:
  Fly   187 IKWLLLLVEFAALGAATHLGITVRNKLRRERF 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 34/130 (26%)
tetraspanin_LEL 94..178 CDD:239401 24/87 (28%)
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 34/130 (26%)
tetraspanin_LEL 96..180 CDD:239401 25/92 (27%)

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