DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp42Ek

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_523637.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:219 Identity:73/219 - (33%)
Similarity:110/219 - (50%) Gaps:6/219 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPDAYAIGILILGGTILVISLFGCCGAVR 65
            |||.:|.:|..|...|.|.|:.|:.::....|.....|.||.:.:..|||.|.|.::.||||...
  Fly     1 MGCTSGCVKCFLNTLNTLNALSGLSLIAIATLALSKAPIAYILFLYGLGGIIFVSAVLGCCGICM 65

  Fly    66 ESPRMLWTYASLLL--ILLLLIVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMDIIQKTYYC 128
            |:..|..||..|||  :::.|:..|.....::..:|:|.:.|:.:|:.|..:||:|||.|..|.|
  Fly    66 ENVCMTATYGFLLLAQLIISLLGIFRFKFTEEYIEKFAAEEVQMKWDEELVEPGAMDIYQTVYEC 130

  Fly   129 CGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLGYLEWGLLGF 193
            |||||..||:.|  ...|:|.||...:....|  .|:.||:.|..|.|....:......|..||.
  Fly   131 CGRDSPDDYVAI--GRQTLPPSCYPQEDPQMP--HYLAGCVQKSSENFVVLFSYAHDTNWIALGI 191

  Fly   194 NAVILLLAIILAIHYTNRRRRYNY 217
            ..::::.|..|...:..:|.||.|
  Fly   192 TILMMIAAFYLVGRFRKQRVRYTY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 41/123 (33%)
tetraspanin_LEL 94..178 CDD:239401 32/83 (39%)
Tsp42EkNP_523637.1 Tetraspanin 8..>132 CDD:459767 41/123 (33%)
tetraspanin_LEL 94..174 CDD:239401 31/83 (37%)

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