DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp39D

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:249 Identity:65/249 - (26%)
Similarity:108/249 - (43%) Gaps:62/249 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGL---------------GWGAMPDAYAIGILILGGTILVISL 57
            :||..|..|.|:|:.|:|:.:.||:               .|.|     .|.::|:|..:.||..
  Fly     9 VKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTA-----PIILMIVGAAVAVICF 68

  Fly    58 FGCCGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVFKKYAL-QTVENQ------------- 108
            .|||||::||..|:.::|.|.:::.|..:.   |......|...| |.:|:|             
  Fly    69 LGCCGALKESSCMILSFALLAVVIFLFEIG---LGLAGYVKHTGLHQIMESQFNSTMQHYKERAD 130

  Fly   109 ----WELEQTKPGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCC------KDDSCVNPLNL 163
                |.|.||:   :|       |||.:...|: :..:.|:|:|::||      :...|.| .:.
  Fly   131 YRDAWTLLQTE---LD-------CCGINGPNDW-ETVYRNSTLPAACCSVINLSEAKECTN-THA 183

  Fly   164 YVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRRRRYNY 217
            ...|||.|:.|....:...|..:..|:.|...:.:|.|..|   |.:.||.|::
  Fly   184 TQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL---YRSFRRSYDH 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 40/154 (26%)
tetraspanin_LEL 94..178 CDD:239401 26/107 (24%)
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 61/239 (26%)
tetraspanin_LEL 131..>167 CDD:351888 12/46 (26%)

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