DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp29Fb

DIOPT Version :9

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001137809.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster


Alignment Length:258 Identity:64/258 - (24%)
Similarity:111/258 - (43%) Gaps:63/258 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATGTIKYSLFLFNALWAILGILVL--------IFGGL-----GWGAMPDAYAIGILILGGTI 52
            |.||    ||.|.:.:.::|:..||::        |||..     |..:.|.|..|.|   |..:
  Fly    12 MKCA----KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAI---GFIL 69

  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVEN---QW 109
            :.::..|..|||:||..::..|...|.::.:|     |.||::   :...:...::|:..   ::
  Fly    70 IAVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVM---QSQVRGMLIRTMNQALAEY 131

  Fly   110 ELEQTKPGSMDIIQKTYYCCGRDSAQDYLD-----IKFW----NNTVPSSCC-------KDDSCV 158
            |.:......:|.:|....|||.:..:|:.|     :.|.    :..||:|||       .|.:.:
  Fly   132 EHDPYVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQM 196

  Fly   159 NPLNLYVRGCLIKVE-------EAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRRRR 214
            ..:..|..||..|:.       ...|..|||:.:::  |||     :|.|.:||  .|.||.:
  Fly   197 TCMETYDYGCFRKMNFIVSQSAMLIATGATTVAFVQ--LLG-----VLCAFMLA--KTLRRNK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspannin 7..196 CDD:278750 54/232 (23%)
tetraspanin_LEL 94..178 CDD:239401 20/109 (18%)
Tsp29FbNP_001137809.1 Tetraspannin 14..246 CDD:278750 60/250 (24%)
tetraspanin_LEL 110..218 CDD:239401 21/110 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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