DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and cd82a

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:249 Identity:77/249 - (30%)
Similarity:109/249 - (43%) Gaps:57/249 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPDAYAIGIL------------IL---GGT 51
            ||.|.| ||.|||||.::.|.|..::.||  .|..:.:...|.:|            ||   |..
Zfish     4 GCITAT-KYFLFLFNFIFFIFGATIMGFG--LWILLDNQSLIAVLQESSVILKVVSYILIGVGSF 65

  Fly    52 ILVISLFGCCGAVRESPRMLWTYASLLLILLL--LIVAFIILNPKDVFK----KYALQTVENQWE 110
            .:::...||.||:.|...:|..|.:.||::||  :.|:.:|...:|:.|    |...|.|.|...
Zfish    66 SMLLGFLGCLGAIYEIRCLLGLYFTCLLLILLAQVAVSILIYFQRDLLKTEADKIVSQVVANYPG 130

  Fly   111 LEQTKPGSMDIIQKTYYCCGRDSAQDYLD---IKFWNNTVPSSCCKDDSCVN--------PLN-- 162
            ..:|...:.|.:|:|..|||.:...|:.:   ||  |||||...|   ||.|        |.|  
Zfish   131 QNKTAEQAWDYLQRTMQCCGWNGRMDWDENHIIK--NNTVPLYPC---SCHNYSIQAPIVPDNGF 190

  Fly   163 ---------LYVRGCLIKVEE-AFADEATTLGYLEWGLLGFNAVILLLAIILAI 206
                     :|..|||..|.. .|.:....||.    .||. |||.||.:|.::
Zfish   191 CQASSSDWPIYQTGCLEHVGSWLFTNYGIILGI----CLGV-AVIELLGMIFSM 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 41/142 (29%)
tetraspanin_LEL 94..178 CDD:239401 33/110 (30%)
cd82aNP_997826.3 None

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