DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and cd63

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:225 Identity:56/225 - (24%)
Similarity:104/225 - (46%) Gaps:30/225 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGL------------GWGAMPDAYAIGILILGGTILVISLFGC 60
            :||.||.||.::.:.|:.:::.|.|            |....|    :.::::|..|..||.|||
Zfish    10 VKYLLFFFNFIFWLCGLALIVLGILVHVSLHNTAILQGASGSP----MVLIVVGVIIFFISFFGC 70

  Fly    61 CGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMD 120
            |||.:|:..|:.|:|.:|.::::.     |..:|.....:.....:..|:...:...:....::|
Zfish    71 CGAWKENQCMVVTFAIILSLIVITEIGAGIAGYIFRGKVNELLDQSFNTMIAGYNKTEEYRTTLD 135

  Fly   121 IIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKD--DSC-----VNPLNLYVRGCLIKVEEAFAD 178
            .|||...|||.:|:.|:::....:.:||.||||:  .:|     ..|..:|:.||...:|....:
Zfish   136 SIQKQLKCCGGNSSSDWVNFSADHISVPDSCCKNVTKNCGIGAMTKPTVIYLEGCQPILETRIKE 200

  Fly   179 EA--TTLGYLEWGLLGFNAVILLLAIILAI 206
            ..  ..:|.|..|.:....::|...:..||
Zfish   201 NILWIAVGALVIGFVQITGIVLACILSRAI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 34/138 (25%)
tetraspanin_LEL 94..178 CDD:239401 22/90 (24%)
cd63NP_955837.1 Tetraspanin 10..228 CDD:459767 54/221 (24%)
CD63_LEL 103..202 CDD:239419 23/98 (23%)

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