DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tsp5D

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster


Alignment Length:249 Identity:62/249 - (24%)
Similarity:103/249 - (41%) Gaps:54/249 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLFNALWAILGILVLIFGGLGW------GAMPDAYAIGILILGGTILVISLFGCCGAVRESPRML 71
            ||...||     |.|.:.|...      |...|...:||   |||..|:|.||||||..:|..:|
  Fly    27 FLGAGLW-----LRLSYAGYATLLPQHAGLSADTIFMGI---GGTGFVVSFFGCCGAWVQSRCLL 83

  Fly    72 WTYASLLLILLLLIVAFIILNPKDVFKKYALQTVENQWEL------EQTKPGSM---------DI 121
            ..|  .:||::|.:..|::.:...:|:....:|:.|:...      ..:..||:         |.
  Fly    84 VLY--FMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNSSDRGSLVAPSVASIWDS 146

  Fly   122 IQKTYYCCGRDSAQDYLDIKFW--NNTVPSSCCK---DDSCV------------------NPLNL 163
            :|:::.|||..|.:|:.||:.|  ...||.|||:   |...|                  ||...
  Fly   147 VQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGSGDGMMRPDCGRSENPSLW 211

  Fly   164 YVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILAIHYTNRRRRYNY 217
            :.:||...::..|..:...:|.:..|:.......|:.:::|.....::|....|
  Fly   212 WDKGCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVKHKRASDTY 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 37/137 (27%)
tetraspanin_LEL 94..178 CDD:239401 27/121 (22%)
Tsp5DNP_001259266.1 Tetraspanin 9..254 CDD:459767 60/236 (25%)
NET-5_like_LEL 105..228 CDD:239418 27/122 (22%)

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