Protein Alignment Tsp42El and Tspan4

DIOPT Version :10

• Sequence 1: NP_523638.1
• Gene: Tsp42El / 35622
• FlyBaseID: FBgn0033134
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: NP_001426627.1
• Gene: Tspan4 / 293627
• RGDID: 1305810
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 232
• Identity: 69/232 - (29%)
• Similarity: 108/232 - (46%)
• Gaps: 38/232 - (16%)

  Fly     2 GCATGTIKYSLFLFNALWAILGILVLIFGGLG-W------------GAMPDAYAIGILILGGT-I 52
            ||..| :||.:|.||.|:.:.|..||   |:| |            .:.|...|..:||:.|| :
  Rat    99 GCLQG-VKYLMFAFNLLFWLGGCGVL---GVGIWLAATQGNFATLSSSFPSLSAANLLIVTGTFV 159

  Fly    53 LVISLFGCCGAVRESPRMLWTYASLLLILLLL--IVAFIILNPKDVFKKYALQTVENQWELEQTK 115
            :.|...||.||::|:..:|.|:..|||::.||  .:|.:.....|....||.|.::....|..|:
  Rat   160 MAIGFVGCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYGTE 224

  Fly   116 -----PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNT-VPSSCCKD--DSC--VNPLNLYVRGCLI 170
                 ..:..|||..:.|||..:..|:.::  :|.| ||.|||.:  |||  ..|...:...|..
  Rat   225 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEV--YNATRVPDSCCLEFSDSCGLHEPGTWWKSPCYE 287

  Fly   171 KVEEAFADEATTLGYLEWGLLGF-NAVILLLAIILAI 206
            .| :|:..|    ..|..|:.|. .|::.:|.:..|:
  Rat   288 TV-KAWLQE----NLLAVGIFGLCTALVQILGLTFAM 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42El	NP_523638.1	Tetraspanin	8..>130	CDD:459767	42/142 (30%)
		tetraspanin_LEL	94..178	CDD:239401	27/93 (29%)
Tspan4	NP_001426627.1	None